Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.66■□□□□ 0.26
Cacna2d4Q5RJF7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna2d4Q5RJF7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna2d4Q5RJF7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna2d4Q5RJF7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna2d4Q5RJF7 Gm12008-201ENSMUST00000117791 755 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms