Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Srrm1Q52KI8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Srrm1Q52KI8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Srrm1Q52KI8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Srrm1Q52KI8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Shd-206ENSMUST00000225145 998 ntBASIC16.7■□□□□ 0.26
Srrm1Q52KI8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Srrm1Q52KI8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Gm45384-201ENSMUST00000210451 277 ntBASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Srrm1Q52KI8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm1Q52KI8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm1Q52KI8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms