Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim40Q3UWA4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim40Q3UWA4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.03□□□□□ -0.16
Trim40Q3UWA4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim40Q3UWA4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim40Q3UWA4 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms