Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc4Q08624 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.31□□□□□ -0.12
Hoxc4Q08624 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm9726-201ENSMUST00000180321 678 ntBASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm27622-201ENSMUST00000183779 60 ntBASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm27306-201ENSMUST00000183970 107 ntBASIC14.31□□□□□ -0.12
Hoxc4Q08624 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.31□□□□□ -0.12
Hoxc4Q08624 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc4Q08624 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Gm5566-201ENSMUST00000116118 459 ntBASIC14.3□□□□□ -0.12
Hoxc4Q08624 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.3□□□□□ -0.12
Hoxc4Q08624 Gm13823-201ENSMUST00000119930 345 ntBASIC14.3□□□□□ -0.12
Hoxc4Q08624 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.3□□□□□ -0.12
Hoxc4Q08624 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc4Q08624 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Gm20949-201ENSMUST00000206478 952 ntBASIC14.29□□□□□ -0.12
Hoxc4Q08624 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms