Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Lsm6P62313 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm6P62313 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lsm6P62313 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm6P62313 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm6P62313 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm6P62313 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm6P62313 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm6P62313 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.12□□□□□ -0.31
Lsm6P62313 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Lsm6P62313 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lsm6P62313 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm6P62313 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm6P62313 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Gm27628-201ENSMUST00000184911 107 ntBASIC13.11□□□□□ -0.31
Lsm6P62313 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.11□□□□□ -0.31
Lsm6P62313 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.11□□□□□ -0.31
Lsm6P62313 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.11□□□□□ -0.31
Lsm6P62313 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
Lsm6P62313 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lsm6P62313 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm6P62313 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Lsm6P62313 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm6P62313 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.11□□□□□ -0.31
Lsm6P62313 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.1□□□□□ -0.31
Lsm6P62313 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Lsm6P62313 Gm12350-201ENSMUST00000121208 462 ntBASIC13.1□□□□□ -0.31
Lsm6P62313 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm6P62313 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.1□□□□□ -0.31
Lsm6P62313 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm6P62313 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm6P62313 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm6P62313 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.09□□□□□ -0.31
Lsm6P62313 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.09□□□□□ -0.31
Lsm6P62313 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lsm6P62313 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.09□□□□□ -0.31
Lsm6P62313 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lsm6P62313 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.09□□□□□ -0.31
Lsm6P62313 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.09□□□□□ -0.31
Lsm6P62313 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lsm6P62313 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.09□□□□□ -0.31
Lsm6P62313 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm6P62313 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm6P62313 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms