Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.1□□□□□ -0.47
Sssca1P56873 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sssca1P56873 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Sssca1P56873 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.1□□□□□ -0.47
Sssca1P56873 Olfr129-201ENSMUST00000122318 993 ntBASIC12.1□□□□□ -0.47
Sssca1P56873 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sssca1P56873 Gm23634-201ENSMUST00000175071 91 ntBASIC12.1□□□□□ -0.47
Sssca1P56873 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sssca1P56873 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.1□□□□□ -0.47
Sssca1P56873 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sssca1P56873 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sssca1P56873 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sssca1P56873 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.09□□□□□ -0.47
Sssca1P56873 Celf4-206ENSMUST00000224553 1729 ntBASIC12.09□□□□□ -0.47
Sssca1P56873 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.09□□□□□ -0.47
Sssca1P56873 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Gm4459-201ENSMUST00000118750 468 ntBASIC12.09□□□□□ -0.47
Sssca1P56873 AA414768-201ENSMUST00000121924 1257 ntBASIC12.09□□□□□ -0.47
Sssca1P56873 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.09□□□□□ -0.47
Sssca1P56873 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sssca1P56873 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.09□□□□□ -0.47
Sssca1P56873 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.09□□□□□ -0.47
Sssca1P56873 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.09□□□□□ -0.47
Sssca1P56873 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sssca1P56873 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sssca1P56873 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sssca1P56873 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.08□□□□□ -0.47
Sssca1P56873 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sssca1P56873 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sssca1P56873 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sssca1P56873 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Sssca1P56873 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.08□□□□□ -0.48
Sssca1P56873 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sssca1P56873 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.08□□□□□ -0.48
Sssca1P56873 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Sssca1P56873 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Sssca1P56873 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Sssca1P56873 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.08□□□□□ -0.48
Sssca1P56873 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.08□□□□□ -0.48
Sssca1P56873 Gm8318-201ENSMUST00000182954 872 ntBASIC12.08□□□□□ -0.48
Sssca1P56873 Gm27742-201ENSMUST00000184667 60 ntBASIC12.08□□□□□ -0.48
Sssca1P56873 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms