Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.19■□□□□ 0.02
Sox1P53783 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.19■□□□□ 0.02
Sox1P53783 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Sox1P53783 Gm18753-201ENSMUST00000201000 566 ntBASIC15.19■□□□□ 0.02
Sox1P53783 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Sox1P53783 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox1P53783 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox1P53783 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox1P53783 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox1P53783 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sox1P53783 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.18■□□□□ 0.02
Sox1P53783 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox1P53783 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox1P53783 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.18■□□□□ 0.02
Sox1P53783 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox1P53783 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox1P53783 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox1P53783 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox1P53783 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox1P53783 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Gm14723-201ENSMUST00000118686 215 ntBASIC15.17■□□□□ 0.02
Sox1P53783 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Gm4857-201ENSMUST00000192718 785 ntBASIC15.17■□□□□ 0.02
Sox1P53783 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox1P53783 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sox1P53783 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox1P53783 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox1P53783 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox1P53783 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox1P53783 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox1P53783 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.17■□□□□ 0.02
Sox1P53783 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox1P53783 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox1P53783 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Sox1P53783 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox1P53783 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sox1P53783 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sox1P53783 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sox1P53783 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.16■□□□□ 0.02
Sox1P53783 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Mir1894-201ENSMUST00000122802 81 ntBASIC15.16■□□□□ 0.02
Sox1P53783 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.16■□□□□ 0.02
Sox1P53783 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Sox1P53783 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sox1P53783 Gm9229-201ENSMUST00000222777 126 ntBASIC15.16■□□□□ 0.02
Sox1P53783 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Sox1P53783 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.16■□□□□ 0.02
Sox1P53783 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox1P53783 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox1P53783 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.16■□□□□ 0.02
Sox1P53783 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox1P53783 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms