Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.14■□□□□ 0.01
Lhx3P50481 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lhx3P50481 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.13■□□□□ 0.01
Lhx3P50481 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx3P50481 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx3P50481 Gm44335-201ENSMUST00000196879 141 ntBASIC15.13■□□□□ 0.01
Lhx3P50481 Gm44297-201ENSMUST00000198304 141 ntBASIC15.13■□□□□ 0.01
Lhx3P50481 Gm44346-201ENSMUST00000198851 141 ntBASIC15.13■□□□□ 0.01
Lhx3P50481 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.13■□□□□ 0.01
Lhx3P50481 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx3P50481 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lhx3P50481 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx3P50481 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Lhx3P50481 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Gm26308-201ENSMUST00000157768 69 ntBASIC15.12■□□□□ 0.01
Lhx3P50481 Mir6990-201ENSMUST00000183724 91 ntBASIC15.12■□□□□ 0.01
Lhx3P50481 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lhx3P50481 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.12■□□□□ 0.01
Lhx3P50481 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.12■□□□□ 0.01
Lhx3P50481 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lhx3P50481 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lhx3P50481 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx3P50481 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lhx3P50481 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lhx3P50481 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Lhx3P50481 Gm8749-201ENSMUST00000117737 331 ntBASIC15.11■□□□□ 0.01
Lhx3P50481 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.11■□□□□ 0.01
Lhx3P50481 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lhx3P50481 Gm27920-201ENSMUST00000183953 96 ntBASIC15.11■□□□□ 0.01
Lhx3P50481 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lhx3P50481 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.11■□□□□ 0.01
Lhx3P50481 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Lhx3P50481 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx3P50481 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lhx3P50481 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms