Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Gm15467-201ENSMUST00000120582 445 ntBASIC13.83□□□□□ -0.2
Foxa1P35582 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Gm17968-201ENSMUST00000194902 784 ntBASIC13.83□□□□□ -0.2
Foxa1P35582 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.83□□□□□ -0.2
Foxa1P35582 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.83□□□□□ -0.2
Foxa1P35582 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.83□□□□□ -0.2
Foxa1P35582 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.82□□□□□ -0.2
Foxa1P35582 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Foxa1P35582 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.82□□□□□ -0.2
Foxa1P35582 Thap2-203ENSMUST00000218989 527 ntBASIC13.82□□□□□ -0.2
Foxa1P35582 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.82□□□□□ -0.2
Foxa1P35582 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.82□□□□□ -0.2
Foxa1P35582 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxa1P35582 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxa1P35582 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Gm16198-201ENSMUST00000118766 670 ntBASIC13.81□□□□□ -0.2
Foxa1P35582 Gm14494-201ENSMUST00000118786 435 ntBASIC13.81□□□□□ -0.2
Foxa1P35582 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Mir3113-201ENSMUST00000175478 76 ntBASIC13.81□□□□□ -0.2
Foxa1P35582 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Gm8000-201ENSMUST00000188378 592 ntBASIC13.81□□□□□ -0.2
Foxa1P35582 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.81□□□□□ -0.2
Foxa1P35582 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Foxa1P35582 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.81□□□□□ -0.2
Foxa1P35582 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxa1P35582 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
Foxa1P35582 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms