Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.88□□□□□ -0.03
Nckap1P28660 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nckap1P28660 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nckap1P28660 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nckap1P28660 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Nckap1P28660 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.87□□□□□ -0.03
Nckap1P28660 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nckap1P28660 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nckap1P28660 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nckap1P28660 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.87□□□□□ -0.03
Nckap1P28660 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nckap1P28660 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nckap1P28660 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Nckap1P28660 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Nckap1P28660 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nckap1P28660 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.86□□□□□ -0.03
Nckap1P28660 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.86□□□□□ -0.03
Nckap1P28660 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nckap1P28660 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nckap1P28660 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.86□□□□□ -0.03
Nckap1P28660 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.86□□□□□ -0.03
Nckap1P28660 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Nckap1P28660 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nckap1P28660 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.85□□□□□ -0.03
Nckap1P28660 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nckap1P28660 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Nckap1P28660 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Mir7023-201ENSMUST00000185093 64 ntBASIC14.85□□□□□ -0.03
Nckap1P28660 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.85□□□□□ -0.03
Nckap1P28660 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nckap1P28660 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Nckap1P28660 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nckap1P28660 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nckap1P28660 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms