Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a2P25318 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a2P25318 Asic1-205ENSMUST00000228185 1818 ntBASIC12.48□□□□□ -0.41
Col8a2P25318 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.48□□□□□ -0.41
Col8a2P25318 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.48□□□□□ -0.41
Col8a2P25318 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.48□□□□□ -0.41
Col8a2P25318 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Col8a2P25318 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.48□□□□□ -0.41
Col8a2P25318 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.48□□□□□ -0.41
Col8a2P25318 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.48□□□□□ -0.41
Col8a2P25318 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col8a2P25318 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a2P25318 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col8a2P25318 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Col8a2P25318 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col8a2P25318 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col8a2P25318 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.47□□□□□ -0.41
Col8a2P25318 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.47□□□□□ -0.41
Col8a2P25318 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.47□□□□□ -0.41
Col8a2P25318 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.47□□□□□ -0.41
Col8a2P25318 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a2P25318 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col8a2P25318 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col8a2P25318 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Col8a2P25318 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col8a2P25318 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col8a2P25318 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Col8a2P25318 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.46□□□□□ -0.41
Col8a2P25318 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.46□□□□□ -0.41
Col8a2P25318 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Gm18889-201ENSMUST00000174284 929 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Gm2272-201ENSMUST00000194903 582 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Gm43474-201ENSMUST00000196415 774 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col8a2P25318 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col8a2P25318 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.46□□□□□ -0.41
Col8a2P25318 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col8a2P25318 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms