Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.35□□□□□ -0.11
Hcn1O88704 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hcn1O88704 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hcn1O88704 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcn1O88704 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hcn1O88704 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.34□□□□□ -0.11
Hcn1O88704 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcn1O88704 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.34□□□□□ -0.11
Hcn1O88704 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Gm12134-201ENSMUST00000122109 520 ntBASIC14.34□□□□□ -0.11
Hcn1O88704 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.34□□□□□ -0.11
Hcn1O88704 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.34□□□□□ -0.11
Hcn1O88704 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.34□□□□□ -0.11
Hcn1O88704 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.34□□□□□ -0.11
Hcn1O88704 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.34□□□□□ -0.11
Hcn1O88704 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hcn1O88704 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Gm15590-201ENSMUST00000078419 552 ntBASIC14.34□□□□□ -0.11
Hcn1O88704 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcn1O88704 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.34□□□□□ -0.11
Hcn1O88704 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcn1O88704 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn1O88704 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn1O88704 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn1O88704 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn1O88704 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hcn1O88704 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcn1O88704 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.33□□□□□ -0.11
Hcn1O88704 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.33□□□□□ -0.12
Hcn1O88704 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.33□□□□□ -0.12
Hcn1O88704 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.33□□□□□ -0.12
Hcn1O88704 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.33□□□□□ -0.12
Hcn1O88704 Gm5682-201ENSMUST00000173402 505 ntBASIC14.33□□□□□ -0.12
Hcn1O88704 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Hcn1O88704 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hcn1O88704 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hcn1O88704 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcn1O88704 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Hcn1O88704 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Gm13036-201ENSMUST00000117799 748 ntBASIC14.32□□□□□ -0.12
Hcn1O88704 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Hcn1O88704 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.32□□□□□ -0.12
Hcn1O88704 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.32□□□□□ -0.12
Hcn1O88704 Gm6443-201ENSMUST00000203599 874 ntBASIC14.32□□□□□ -0.12
Hcn1O88704 AW822252-206ENSMUST00000208904 237 ntBASIC14.32□□□□□ -0.12
Hcn1O88704 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.32□□□□□ -0.12
Hcn1O88704 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms