Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops4O88544 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cops4O88544 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops4O88544 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.82□□□□□ -0.2
Cops4O88544 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops4O88544 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cops4O88544 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.82□□□□□ -0.2
Cops4O88544 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cops4O88544 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cops4O88544 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops4O88544 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops4O88544 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cops4O88544 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops4O88544 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.82□□□□□ -0.2
Cops4O88544 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.82□□□□□ -0.2
Cops4O88544 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.82□□□□□ -0.2
Cops4O88544 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops4O88544 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops4O88544 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Cops4O88544 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops4O88544 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cops4O88544 Carlr-201ENSMUST00000181515 2574 ntBASIC13.81□□□□□ -0.2
Cops4O88544 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cops4O88544 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops4O88544 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.81□□□□□ -0.2
Cops4O88544 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops4O88544 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.8□□□□□ -0.2
Cops4O88544 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cops4O88544 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cops4O88544 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops4O88544 Gm13312-201ENSMUST00000119631 718 ntBASIC13.8□□□□□ -0.2
Cops4O88544 Gm15794-201ENSMUST00000120182 631 ntBASIC13.8□□□□□ -0.2
Cops4O88544 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.8□□□□□ -0.2
Cops4O88544 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops4O88544 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms