Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm8097-201ENSMUST00000117903 829 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Gm15372-201ENSMUST00000120729 834 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Gm13836-201ENSMUST00000121159 501 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Gm7284-201ENSMUST00000131667 944 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Cops3O88543 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.42□□□□□ -0.26
Cops3O88543 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cops3O88543 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops3O88543 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.42□□□□□ -0.26
Cops3O88543 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.42□□□□□ -0.26
Cops3O88543 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.41□□□□□ -0.26
Cops3O88543 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cops3O88543 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.41□□□□□ -0.26
Cops3O88543 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.41□□□□□ -0.26
Cops3O88543 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Gm15358-201ENSMUST00000119249 520 ntBASIC13.41□□□□□ -0.26
Cops3O88543 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops3O88543 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.41□□□□□ -0.26
Cops3O88543 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cops3O88543 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.41□□□□□ -0.26
Cops3O88543 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops3O88543 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cops3O88543 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops3O88543 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.4□□□□□ -0.26
Cops3O88543 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.4□□□□□ -0.26
Cops3O88543 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Gm27357-201ENSMUST00000183754 135 ntBASIC13.4□□□□□ -0.26
Cops3O88543 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.4□□□□□ -0.26
Cops3O88543 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cops3O88543 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Cops3O88543 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops3O88543 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cops3O88543 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cops3O88543 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cops3O88543 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms