Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Gm14140-201ENSMUST00000119999 995 ntBASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Psmb5-202ENSMUST00000227257 622 ntBASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-3J3QMG8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gm1401-201ENSMUST00000122048 772 ntBASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-3J3QMG8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms