Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Gm15823-201ENSMUST00000064305 670 ntBASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tarbp1E9Q368 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Gm18018-201ENSMUST00000198273 408 ntBASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Gm18624-201ENSMUST00000220966 658 ntBASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tarbp1E9Q368 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Gm23984-201ENSMUST00000157139 203 ntBASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Gm6745-201ENSMUST00000199216 526 ntBASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tarbp1E9Q368 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tarbp1E9Q368 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms