Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh17E9PXF0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gm43474-201ENSMUST00000196415 774 ntBASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh17E9PXF0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Gm43125-201ENSMUST00000201724 730 ntBASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh17E9PXF0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh17E9PXF0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdh17E9PXF0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh17E9PXF0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms