Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gm6257-201ENSMUST00000163864 910 ntBASIC12.01□□□□□ -0.49
Chd6A3KFM7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.01□□□□□ -0.49
Chd6A3KFM7 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gm9229-201ENSMUST00000222777 126 ntBASIC12.01□□□□□ -0.49
Chd6A3KFM7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.01□□□□□ -0.49
Chd6A3KFM7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.01□□□□□ -0.49
Chd6A3KFM7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd6A3KFM7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Gm22323-201ENSMUST00000103832 109 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm2383-201ENSMUST00000181461 807 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Gm27486-201ENSMUST00000184923 80 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chd6A3KFM7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Gm5279-201ENSMUST00000199575 745 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chd6A3KFM7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm6203-201ENSMUST00000209575 1342 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chd6A3KFM7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12□□□□□ -0.49
Chd6A3KFM7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm7467-201ENSMUST00000185173 652 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Abhd11os-203ENSMUST00000222613 363 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd6A3KFM7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12□□□□□ -0.49
Chd6A3KFM7 Gm14026-201ENSMUST00000120625 1789 ntBASIC12□□□□□ -0.49
Chd6A3KFM7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.99□□□□□ -0.49
Chd6A3KFM7 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.99□□□□□ -0.49
Chd6A3KFM7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.99□□□□□ -0.49
Chd6A3KFM7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd6A3KFM7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd6A3KFM7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.98□□□□□ -0.49
Chd6A3KFM7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Gm13342-201ENSMUST00000121055 207 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms