Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
H2afb3S4R1G7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb3S4R1G7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Efs-202ENSMUST00000227037 2540 ntBASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Gm6296-201ENSMUST00000222599 943 ntBASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
H2afb3S4R1G7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms