Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm18737-201ENSMUST00000173594 937 ntBASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1h3Q9Z0Y9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm11543-201ENSMUST00000120758 370 ntBASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1h3Q9Z0Y9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1h3Q9Z0Y9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm6973-201ENSMUST00000117080 721 ntBASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm27321-201ENSMUST00000185021 205 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms