Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Gm45167-201ENSMUST00000208007 322 ntBASIC14.35□□□□□ -0.11
Vps29Q9QZ88 AV026068-213ENSMUST00000223675 1171 ntBASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps29Q9QZ88 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Gm28659-201ENSMUST00000188013 759 ntBASIC14.34□□□□□ -0.11
Vps29Q9QZ88 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps29Q9QZ88 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps29Q9QZ88 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps29Q9QZ88 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps29Q9QZ88 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps29Q9QZ88 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.33□□□□□ -0.12
Vps29Q9QZ88 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Gm13884-201ENSMUST00000118103 829 ntBASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vps29Q9QZ88 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vps29Q9QZ88 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps29Q9QZ88 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps29Q9QZ88 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps29Q9QZ88 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms