Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Gm15165-201ENSMUST00000118140 502 ntBASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Gm4459-201ENSMUST00000118750 468 ntBASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Olfr129-201ENSMUST00000122318 993 ntBASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm4Q9QXA5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm4Q9QXA5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gm10231-201ENSMUST00000181584 441 ntBASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gm10175-202ENSMUST00000208752 441 ntBASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms