Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prg4Q9JM99 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prg4Q9JM99 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prg4Q9JM99 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prg4Q9JM99 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prg4Q9JM99 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prg4Q9JM99 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.61□□□□□ -0.23
Prg4Q9JM99 Gm43125-201ENSMUST00000201724 730 ntBASIC13.61□□□□□ -0.23
Prg4Q9JM99 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prg4Q9JM99 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.6□□□□□ -0.23
Prg4Q9JM99 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm27920-201ENSMUST00000183953 96 ntBASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm43474-201ENSMUST00000196415 774 ntBASIC13.6□□□□□ -0.23
Prg4Q9JM99 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.6□□□□□ -0.23
Prg4Q9JM99 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.6□□□□□ -0.23
Prg4Q9JM99 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prg4Q9JM99 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prg4Q9JM99 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms