Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh2d4aQ9D7V1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh2d4aQ9D7V1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh2d4aQ9D7V1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d4aQ9D7V1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.52□□□□□ -0.09
Sh2d4aQ9D7V1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sh2d4aQ9D7V1 Gm15165-201ENSMUST00000118140 502 ntBASIC14.52□□□□□ -0.09
Sh2d4aQ9D7V1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms