Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1aQ9D132 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1aQ9D132 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1aQ9D132 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk1aQ9D132 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.21□□□□□ -0.13
Upk1aQ9D132 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.21□□□□□ -0.13
Upk1aQ9D132 Gm15165-201ENSMUST00000118140 502 ntBASIC14.21□□□□□ -0.13
Upk1aQ9D132 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Gm25745-201ENSMUST00000174945 133 ntBASIC14.21□□□□□ -0.13
Upk1aQ9D132 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk1aQ9D132 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk1aQ9D132 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk1aQ9D132 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk1aQ9D132 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk1aQ9D132 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk1aQ9D132 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.2□□□□□ -0.14
Upk1aQ9D132 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.2□□□□□ -0.14
Upk1aQ9D132 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.2□□□□□ -0.14
Upk1aQ9D132 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk1aQ9D132 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.19□□□□□ -0.14
Upk1aQ9D132 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Gm4459-201ENSMUST00000118750 468 ntBASIC14.19□□□□□ -0.14
Upk1aQ9D132 Gm15358-201ENSMUST00000119249 520 ntBASIC14.19□□□□□ -0.14
Upk1aQ9D132 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Gm27867-201ENSMUST00000184778 125 ntBASIC14.19□□□□□ -0.14
Upk1aQ9D132 Gm43767-201ENSMUST00000198933 381 ntBASIC14.19□□□□□ -0.14
Upk1aQ9D132 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.19□□□□□ -0.14
Upk1aQ9D132 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk1aQ9D132 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk1aQ9D132 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms