Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chaf1bQ9D0N7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Gm11950-201ENSMUST00000121615 838 ntBASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chaf1bQ9D0N7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Gm5587-201ENSMUST00000206270 674 ntBASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chaf1bQ9D0N7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Chaf1bQ9D0N7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chaf1bQ9D0N7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chaf1bQ9D0N7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Chaf1bQ9D0N7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chaf1bQ9D0N7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chaf1bQ9D0N7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chaf1bQ9D0N7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms