Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shmt2Q9CZN7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shmt2Q9CZN7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shmt2Q9CZN7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Gm15173-201ENSMUST00000122049 433 ntBASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Gm27646-201ENSMUST00000183989 110 ntBASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt2Q9CZN7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Gm18733-201ENSMUST00000173950 856 ntBASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt2Q9CZN7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Gm6550-201ENSMUST00000187574 993 ntBASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt2Q9CZN7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms