Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm6007-201ENSMUST00000208170 823 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm18624-201ENSMUST00000220966 658 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Gm27631-201ENSMUST00000184163 466 ntBASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Gm10766-202ENSMUST00000194123 606 ntBASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cldnd1Q9CQX5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Mir6420-201ENSMUST00000185032 102 ntBASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Gm9797-201ENSMUST00000052902 613 ntBASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd1Q9CQX5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Mir6392-201ENSMUST00000184924 108 ntBASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Gm43630-201ENSMUST00000201550 776 ntBASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd1Q9CQX5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Gm17150-201ENSMUST00000165577 381 ntBASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms