Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Gm12497-201ENSMUST00000138778 237 ntBASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ska1Q9CPV1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ska1Q9CPV1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Gm25745-201ENSMUST00000174945 133 ntBASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.15□□□□□ -0.14
Ska1Q9CPV1 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.15□□□□□ -0.14
Ska1Q9CPV1 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ska1Q9CPV1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms