Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.47□□□□□ -0.25
Raf1Q99N57 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.47□□□□□ -0.25
Raf1Q99N57 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.47□□□□□ -0.25
Raf1Q99N57 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Raf1Q99N57 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raf1Q99N57 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Raf1Q99N57 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Raf1Q99N57 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.46□□□□□ -0.25
Raf1Q99N57 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.46□□□□□ -0.25
Raf1Q99N57 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.46□□□□□ -0.25
Raf1Q99N57 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Raf1Q99N57 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raf1Q99N57 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raf1Q99N57 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raf1Q99N57 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raf1Q99N57 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raf1Q99N57 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raf1Q99N57 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.45□□□□□ -0.26
Raf1Q99N57 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.45□□□□□ -0.26
Raf1Q99N57 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raf1Q99N57 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raf1Q99N57 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raf1Q99N57 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.44□□□□□ -0.26
Raf1Q99N57 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raf1Q99N57 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Raf1Q99N57 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Raf1Q99N57 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Raf1Q99N57 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms