Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm11478-201ENSMUST00000117851 599 ntBASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm24694-201ENSMUST00000180054 110 ntBASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm27663-201ENSMUST00000184839 110 ntBASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-1Q99MA9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Gm24543-201ENSMUST00000103867 82 ntBASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Gm29667-201ENSMUST00000190817 490 ntBASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx6-1Q99MA9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Gm8515-201ENSMUST00000194852 576 ntBASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms