Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm43767-201ENSMUST00000198933 381 ntBASIC13.14□□□□□ -0.31
Scrt1Q99M85 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.14□□□□□ -0.31
Scrt1Q99M85 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Gm2423-201ENSMUST00000074863 733 ntBASIC13.14□□□□□ -0.31
Scrt1Q99M85 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.13□□□□□ -0.31
Scrt1Q99M85 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.13□□□□□ -0.31
Scrt1Q99M85 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Gm5866-201ENSMUST00000177881 973 ntBASIC13.13□□□□□ -0.31
Scrt1Q99M85 Gm38294-201ENSMUST00000192831 381 ntBASIC13.13□□□□□ -0.31
Scrt1Q99M85 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scrt1Q99M85 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gm16198-201ENSMUST00000118766 670 ntBASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gm24158-201ENSMUST00000175263 71 ntBASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gm10253-201ENSMUST00000194270 940 ntBASIC13.12□□□□□ -0.31
Scrt1Q99M85 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.12□□□□□ -0.31
Scrt1Q99M85 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scrt1Q99M85 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms