Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Sybu-209ENSMUST00000228639 4113 ntBASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Gm14140-201ENSMUST00000119999 995 ntBASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb6Q91XZ4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb6Q91XZ4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Gm1401-201ENSMUST00000122048 772 ntBASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms