Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Celf4-206ENSMUST00000224553 1729 ntBASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rab40cQ8VHQ4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms