Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Top1mtQ8R4U6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Top1mtQ8R4U6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
Top1mtQ8R4U6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Top1mtQ8R4U6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Gm12008-201ENSMUST00000117791 755 ntBASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Top1mtQ8R4U6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Top1mtQ8R4U6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Top1mtQ8R4U6 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms