Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Gm8318-201ENSMUST00000182954 872 ntBASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Mir3081-201ENSMUST00000175305 84 ntBASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup35Q8R4R6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nup35Q8R4R6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms