Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Gm27704-201ENSMUST00000185094 107 ntBASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Gm21362-201ENSMUST00000194272 928 ntBASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tsen54Q8C2A2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Gm7284-201ENSMUST00000131667 944 ntBASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tsen54Q8C2A2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms