Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm27920-201ENSMUST00000183953 96 ntBASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Gm20949-201ENSMUST00000206478 952 ntBASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3rf2Q8BZT2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Gm9824-201ENSMUST00000178707 561 ntBASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3rf2Q8BZT2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Mir7023-201ENSMUST00000185093 64 ntBASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms