Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm6973-201ENSMUST00000117080 721 ntBASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Gm18737-201ENSMUST00000173594 937 ntBASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap1Q8BTW8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk5rap1Q8BTW8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm11543-201ENSMUST00000120758 370 ntBASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdk5rap1Q8BTW8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdk5rap1Q8BTW8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms