Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Gm4535-201ENSMUST00000182274 558 ntBASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Gm10355-201ENSMUST00000097146 517 ntBASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne3Q8BT60 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Gm28033-201ENSMUST00000184224 96 ntBASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpne3Q8BT60 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Gm11780-201ENSMUST00000136880 516 ntBASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cpne3Q8BT60 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms