Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ppp1r3eQ8BRJ4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ppp1r3eQ8BRJ4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ppp1r3eQ8BRJ4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm27867-201ENSMUST00000184778 125 ntBASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Gm34391-201ENSMUST00000203706 907 ntBASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ppp1r3eQ8BRJ4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ppp1r3eQ8BRJ4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms