Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf38Q8BI21 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gm12644-201ENSMUST00000119935 606 ntBASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.47□□□□□ -0.09
Rnf38Q8BI21 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf38Q8BI21 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Gm11780-201ENSMUST00000136880 516 ntBASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Gm10499-201ENSMUST00000174094 934 ntBASIC14.46□□□□□ -0.09
Rnf38Q8BI21 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Gm6296-201ENSMUST00000222599 943 ntBASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rnf38Q8BI21 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms