Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Gm13884-201ENSMUST00000118103 829 ntBASIC16.79■□□□□ 0.28
Abcf1Q6P542 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.79■□□□□ 0.28
Abcf1Q6P542 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.79■□□□□ 0.28
Abcf1Q6P542 Mzt1-203ENSMUST00000227948 952 ntBASIC16.79■□□□□ 0.28
Abcf1Q6P542 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abcf1Q6P542 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abcf1Q6P542 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.77■□□□□ 0.28
Abcf1Q6P542 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Gm18195-201ENSMUST00000207604 706 ntBASIC16.77■□□□□ 0.28
Abcf1Q6P542 Gm8655-201ENSMUST00000221159 852 ntBASIC16.77■□□□□ 0.28
Abcf1Q6P542 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.77■□□□□ 0.28
Abcf1Q6P542 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.77■□□□□ 0.28
Abcf1Q6P542 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Abcf1Q6P542 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abcf1Q6P542 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Abcf1Q6P542 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abcf1Q6P542 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Abcf1Q6P542 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.77■□□□□ 0.27
Abcf1Q6P542 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.77■□□□□ 0.27
Abcf1Q6P542 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.76■□□□□ 0.27
Abcf1Q6P542 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Gm4459-201ENSMUST00000118750 468 ntBASIC16.76■□□□□ 0.27
Abcf1Q6P542 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.76■□□□□ 0.27
Abcf1Q6P542 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcf1Q6P542 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.75■□□□□ 0.27
Abcf1Q6P542 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms