Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.55□□□□□ -0.56
Notch3Q61982 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.55□□□□□ -0.56
Notch3Q61982 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Notch3Q61982 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Notch3Q61982 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Notch3Q61982 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.55□□□□□ -0.56
Notch3Q61982 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Notch3Q61982 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Gm11424-201ENSMUST00000121929 829 ntBASIC11.55□□□□□ -0.56
Notch3Q61982 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.55□□□□□ -0.56
Notch3Q61982 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.55□□□□□ -0.56
Notch3Q61982 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.55□□□□□ -0.56
Notch3Q61982 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Notch3Q61982 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Notch3Q61982 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.54□□□□□ -0.56
Notch3Q61982 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.54□□□□□ -0.56
Notch3Q61982 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Notch3Q61982 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.54□□□□□ -0.56
Notch3Q61982 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Notch3Q61982 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.54□□□□□ -0.56
Notch3Q61982 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Notch3Q61982 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Notch3Q61982 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.53□□□□□ -0.56
Notch3Q61982 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Notch3Q61982 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Rprl2-201ENSMUST00000157150 290 ntBASIC11.53□□□□□ -0.56
Notch3Q61982 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Notch3Q61982 Gm18246-201ENSMUST00000221023 728 ntBASIC11.53□□□□□ -0.56
Notch3Q61982 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Notch3Q61982 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Notch3Q61982 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms