Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Six4Q61321 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.1■□□□□ 0.01
Six4Q61321 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Six4Q61321 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.1■□□□□ 0.01
Six4Q61321 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.1■□□□□ 0.01
Six4Q61321 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.1■□□□□ 0.01
Six4Q61321 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Six4Q61321 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.1■□□□□ 0.01
Six4Q61321 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six4Q61321 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.09■□□□□ 0.01
Six4Q61321 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Six4Q61321 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Gm15427-201ENSMUST00000117288 531 ntBASIC15.09■□□□□ 0.01
Six4Q61321 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.09■□□□□ 0.01
Six4Q61321 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.09■□□□□ 0.01
Six4Q61321 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Six4Q61321 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Six4Q61321 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six4Q61321 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Six4Q61321 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Six4Q61321 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Six4Q61321 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.08■□□□□ 0
Six4Q61321 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.08■□□□□ 0
Six4Q61321 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.08■□□□□ 0
Six4Q61321 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.08■□□□□ 0
Six4Q61321 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.08■□□□□ 0
Six4Q61321 Gm16026-204ENSMUST00000162652 683 ntBASIC15.08■□□□□ 0
Six4Q61321 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Six4Q61321 Rpph1-201ENSMUST00000175096 319 ntBASIC15.08■□□□□ 0
Six4Q61321 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Gm20553-201ENSMUST00000204205 844 ntBASIC15.08■□□□□ 0
Six4Q61321 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.08■□□□□ 0
Six4Q61321 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Six4Q61321 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.08■□□□□ 0
Six4Q61321 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six4Q61321 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Six4Q61321 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.07■□□□□ 0
Six4Q61321 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.07■□□□□ 0
Six4Q61321 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.07■□□□□ 0
Six4Q61321 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six4Q61321 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms