Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Gm13616-201ENSMUST00000120600 222 ntBASIC15.31■□□□□ 0.04
Slc6a4Q60857 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.3■□□□□ 0.04
Slc6a4Q60857 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.3■□□□□ 0.04
Slc6a4Q60857 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.3■□□□□ 0.04
Slc6a4Q60857 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.3■□□□□ 0.04
Slc6a4Q60857 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.3■□□□□ 0.04
Slc6a4Q60857 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a4Q60857 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Gm25948-201ENSMUST00000175334 112 ntBASIC15.29■□□□□ 0.04
Slc6a4Q60857 Gm27920-201ENSMUST00000183953 96 ntBASIC15.29■□□□□ 0.04
Slc6a4Q60857 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.29■□□□□ 0.04
Slc6a4Q60857 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a4Q60857 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a4Q60857 Gm22065-201ENSMUST00000103753 110 ntBASIC15.28■□□□□ 0.04
Slc6a4Q60857 Gm22066-201ENSMUST00000103761 110 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms