Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsmem1Q3UQS2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsmem1Q3UQS2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsmem1Q3UQS2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsmem1Q3UQS2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Gm17271-201ENSMUST00000165535 355 ntBASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Gm20553-201ENSMUST00000204205 844 ntBASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsmem1Q3UQS2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsmem1Q3UQS2 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsmem1Q3UQS2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms