Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Brf2Q3UAW9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brf2Q3UAW9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brf2Q3UAW9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms