Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssbp4Q3U4B1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssbp4Q3U4B1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssbp4Q3U4B1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Celf4-206ENSMUST00000224553 1729 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm10253-201ENSMUST00000194270 940 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssbp4Q3U4B1 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Mir449b-201ENSMUST00000104833 80 ntBASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Auts2-212ENSMUST00000178555 309 ntBASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Gm27430-201ENSMUST00000184585 107 ntBASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Gm44333-201ENSMUST00000197168 107 ntBASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.56□□□□□ -0.4
Ssbp4Q3U4B1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms