Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim43cP86449 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim43cP86449 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm11779-201ENSMUST00000118541 368 ntBASIC16.27■□□□□ 0.2
Trim43cP86449 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.27■□□□□ 0.2
Trim43cP86449 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.27■□□□□ 0.2
Trim43cP86449 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim43cP86449 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim43cP86449 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim43cP86449 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim43cP86449 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43cP86449 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Trim43cP86449 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim43cP86449 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.26■□□□□ 0.19
Trim43cP86449 Gm9385-201ENSMUST00000117563 472 ntBASIC16.26■□□□□ 0.19
Trim43cP86449 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
Trim43cP86449 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim43cP86449 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim43cP86449 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim43cP86449 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim43cP86449 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43cP86449 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim43cP86449 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim43cP86449 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.25■□□□□ 0.19
Trim43cP86449 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim43cP86449 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.25■□□□□ 0.19
Trim43cP86449 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim43cP86449 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trim43cP86449 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43cP86449 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim43cP86449 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim43cP86449 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim43cP86449 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms